Substitution matrix based color schemes for sequence alignment visualization. BMC Bioinformatics. 2020 May 24;21(1):209 Authors: Kunzmann P, Mayer BE, Hamacher K Abstract BACKGROUND: Visualization of multiple sequence alignments often includes colored symbols, usually characters encoding amino acids, according to some (physical) properties, such as hydrophobicity or charge. Typically, color schemes are created manually, so that equal or similar colors...
Tue May 26, 2020 16:10
RintC: fast and accuracy-aware decomposition of distributions of RNA secondary structures with extended logsumexp. BMC Bioinformatics. 2020 May 24;21(1):210 Authors: Takizawa H, Iwakiri J, Asai K Abstract BACKGROUND: Analysis of secondary structures is essential for understanding the functions of RNAs. Because RNA molecules thermally fluctuate, it is necessary to analyze the probability distributions of their secondary structures. Existing methods, however,...
Tue May 26, 2020 16:10
PACVr: plastome assembly coverage visualization in R. BMC Bioinformatics. 2020 May 24;21(1):207 Authors: Gruenstaeudl M, Jenke N Abstract BACKGROUND: Plastid genomes typically display a circular, quadripartite structure with two inverted repeat regions, which challenges automatic assembly procedures. The correct assembly of plastid genomes is a prerequisite for the validity of subsequent analyses on genome structure and evolution. The average coverage...
Tue May 26, 2020 16:10
Subcellular location prediction of apoptosis proteins using two novel feature extraction methods based on evolutionary information and LDA. BMC Bioinformatics. 2020 May 24;21(1):212 Authors: Du L, Meng Q, Chen Y, Wu P Abstract BACKGROUND: Apoptosis, also called programmed cell death, refers to the spontaneous and orderly death of cells controlled by genes in order to maintain a stable internal environment. Identifying the subcellular location of apoptosis...
Tue May 26, 2020 16:10
VADR: validation and annotation of virus sequence submissions to GenBank. BMC Bioinformatics. 2020 May 24;21(1):211 Authors: Schäffer AA, Hatcher EL, Yankie L, Shonkwiler L, Brister JR, Karsch-Mizrachi I, Nawrocki EP Abstract BACKGROUND: GenBank contains over 3 million viral sequences. The National Center for Biotechnology Information (NCBI) previously made available a tool for validating and annotating influenza virus sequences that is used to check...
Tue May 26, 2020 16:10
Bio-semantic relation extraction with attention-based external knowledge reinforcement. BMC Bioinformatics. 2020 May 24;21(1):213 Authors: Li Z, Lian Y, Ma X, Zhang X, Li C Abstract BACKGROUND: Semantic resources such as knowledge bases contains high-quality-structured knowledge and therefore require significant effort from domain experts. Using the resources to reinforce the information retrieval from the unstructured text may further exploit the potentials...
Tue May 26, 2020 16:10
Publication date: Available online 25 May 2020Source: European Journal of Surgical OncologyAuthor(s): Alma L. Moekotte, Stijn van Roessel, Giuseppe Malleo, Rushda Rajak, Brett L. Ecker, Martina Fontana, Ho-Seong Han, Mohamed Rabie, Keith J. Roberts, Khalid Khalil, Steven A. White, Stuart Robinson, Asif Halimi, Laura Zarantonello, Giuseppe K. Fusai, George Gradinariu, Adnan Alseidi, Morgan Bonds, Stephan Dreyer, Nigel B. Jamieson
Tue May 26, 2020 16:08
Publication date: Available online 25 May 2020Source: Sleep MedicineAuthor(s): Armando D’Agostino, Elena Zambrelli
Tue May 26, 2020 16:00
Abstract Identification and characterization of nodules in soft tissue, including their size, shape and location, provide a basis for tumor identification. This study proposes an inverse finite element (FE)‐based computational framework, for characterizing the size of examined tissue sample and detecting the presence of embedded tumor nodules using instrumented palpation, without a priori anatomical knowledge. The inverse analysis was applied to a model system, the human prostate, and was based...
Mon May 25, 2020 21:39
Background Nasopharyngeal carcinoma (NPC), a subclass of neck and head cancers, is the predominant cause of cancer‐associated death globally. LncRNA MAGI2‐AS3 has been previously reported to be associated with multiple cancers, but its molecular mechanism in NPC has not been fully explained. Hence, the purpose of this study is to identify the role and regulatory mechanism of MAGI2‐AS3 in NPC. Methods Reverse‐transcription quantitative polymerase chain reaction (RT‐qPCR) and Western blot (WB)...
Mon May 25, 2020 22:14
Background Recurrent nasopharyngeal carcinoma (rNPC) is mainly managed with re‐irradiation or salvage surgery. Endoscopic resection is generally considered as the preferred surgical treatment, whereas a standard treatment modality has yet to be established. This article is aimed to summarize the treatment outcomes of endoscopic rNPC resection. Methods Major medical databases including PubMed, EMBASE, Cochrane Central Library, Web of Science, and 2 major Chinese databases, CNKI and Wanfang,...
Mon May 25, 2020 19:27
The efficacy and safety of oral low dose naltrexone versus placebo in the patients with lichen planopilaris; a randomized controlled clinical trial. J Dermatolog Treat. 2020 May 23;:1-18 Authors: Lajevardi V, Salarvand F, Ghiasi M, Nasimi M, Taraz M Abstract Background and Objectives: Lichen planopilaris (LPP) is one of the important causes of cicatricial alopecia. We aimed to evaluate the efficacy and safety of low-dose naltrexone (LDN) in the setting...
Tue May 26, 2020 15:55
Publication date: Available online 25 May 2020Source: CortexAuthor(s): Erez Freud, Marlene Behrmann
Tue May 26, 2020 15:55
Publication date: Available online 25 May 2020Source: CortexAuthor(s): Florian Loffing, Norbert Hagemann
Tue May 26, 2020 15:55
Publication date: Available online 25 May 2020Source: CortexAuthor(s): Yanlong Song, Sarah Adams, Wynn Legon
Tue May 26, 2020 15:55
Publication date: Available online 25 May 2020Source: CortexAuthor(s): Heather Iriye, Peggy L.St. Jacques
Tue May 26, 2020 15:55
Publication date: Available online 25 May 2020Source: Journal of Surgical EducationAuthor(s): Radhika Merh, Rebecca Selman
Tue May 26, 2020 15:51
Iodinated contrast media (CM) are utilized in approximately 40% of the 300 million computed tomography (CT) scans undertaken annually. This review focuses on the physicochemical properties and safety of iodinated CM, and the development of new x-ray CM, and it explores methods to optimize CT scanning parameters. It concludes that good x-ray CM should have high structural stability, hydrophilicity, and CT attenuation; low viscosity, osmolality, and protein binding; no metabolism and tissue accumulation;...
Fri May 22, 2020 03:00
Higher Incidence of Syphilis among Patients with HIV Infection: Population Study using Surveillance Data of Tokyo, Japan. Tohoku J Exp Med. 2020;251(1):39-46 Authors: Sugishita Y, Kurita J, Sugawara T, Ohkusa Y Abstract In Japan, the reported cases of syphilis have been increasing since 2011 especially in large cities such as Tokyo. The objective of this study was to evaluate the risk of HIV infection for syphilis co-infection on the population of Tokyo,...
Tue May 26, 2020 15:50
Protease Inhibitors: Candidate Drugs to Inhibit Severe Acute Respiratory Syndrome Coronavirus 2 Replication. Tohoku J Exp Med. 2020;251(1):27-30 Authors: Yamaya M, Nishimura H, Deng X, Kikuchi A, Nagatomi R Abstract The number of patients infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has rapidly increased, although the WHO declared a pandemic. However, drugs that function against SARS-CoV-2 have not been established. SARS-CoV-2...
Tue May 26, 2020 15:50
Publication date: Available online 25 May 2020Source: Journal of Communication DisordersAuthor(s): Carmen Julia Coloma, Zulema De Barbieri, Camilo Quezada, Carolina Bravo, Gabriela Chaf, Claudia Araya
Tue May 26, 2020 15:48
Publication date: Available online 25 May 2020Source: Archives of Oral BiologyAuthor(s): Fatemeh Shahsavari, Mehdi Abbasnejad, Maryam Raoof, Saeed Esmaeili-Mahani
Tue May 26, 2020 15:46
Publication date: Available online 25 May 2020Source: Archives of Oral BiologyAuthor(s): Hui Ying Ren, Yong Sheng Zhao, Yeon-Jee Yoo, Xiao Wen Zhang, Hui Fang, Fang Wang, Hiran Perinpanayagam, Kee-Yeon Kum, Gu Yu
Tue May 26, 2020 15:46
KRT 15 as a prognostic biomarker is highly expressed in esophageal carcinoma. Future Oncol. 2020 May 25;: Authors: Lin JB, Feng Z, Qiu ML, Luo RG, Li X, Liu B Abstract Aim: To investigate the expression and prognostic value of KRT 15 in esophageal carcinoma. Materials & methods: The expression levels of KRT 15 were measured in 128 cases of esophageal carcinoma and matched adjacent normal tissues by immunohistochemistry and Western blot assays. Results...
Tue May 26, 2020 15:45
Radiomics to predict response to immunotherapy: an imminent reality? Future Oncol. 2020 May 23;: Authors: Limkin EJ, Sun R PMID: 32447997 [PubMed - as supplied by publisher]
Tue May 26, 2020 15:45
Making precision surgical strategies a reality: are we ready for a paradigm shift in thoracic surgical oncology? Future Oncol. 2020 May 24;: Authors: Migliore M, Halezeroglu S, Mueller MR PMID: 32447984 [PubMed - as supplied by publisher]
Tue May 26, 2020 15:45
The hypothesis of internal mammary lymph node drainage chain in breast cancer. Future Oncol. 2020 May 23;: Authors: Bi Z, Chen P, Song XR, Wang YS PMID: 32447966 [PubMed - as supplied by publisher]
Tue May 26, 2020 15:45
Publication date: July 2020Source: Acta Histochemica, Volume 122, Issue 5Author(s): Érique Ricardo Alves, Cintia Giselle Martins Ferreira, Maria Vanessa da Silva, Leucio Duarte Vieira Filho, Valdemiro Amaro da Silva Junior, Ismaela Maria Ferreira de Melo, Clovis José Cavalcanti Lapa Neto, Laís Caroline da Silva Santos, Álvaro Aguiar Coelho Teixeira, Valéria Wanderley Teixeira
Tue May 26, 2020 15:33
Publication date: Available online 25 May 2020Source: Archives of Physical Medicine and RehabilitationAuthor(s): Gonzalo Rivera-Lillo, Rodrigo Torres-Castro, Guilherme Fregonezi, Jordi Vilaró, Homero Puppo
Tue May 26, 2020 15:33
Publication date: Available online 25 May 2020Source: Archives of Physical Medicine and RehabilitationAuthor(s): Vishwa S. Raj
Tue May 26, 2020 15:33
Cytogenotoxic evaluation of the acetonitrile extract, citrinin and dicitrinin-A from Penicillium citrinum. Drug Chem Toxicol. 2020 May 25;:1-10 Authors: de Oliveira Filho JWG, Andrade TJADS, de Lima RMT, Silva DHS, Dos Reis AC, Santos JVO, de Meneses APM, de Carvalho RM, da Mata AMO, de Alencar MVOB, Dias ACS, da Silva FCC, Islam MT, Clark CCT, Sousa JMCE, Melo-Cavalcante AAC Abstract Endophytic fungi are promising sources of bioactive substances; however,...
Tue May 26, 2020 15:32
Analyst, 2020, Accepted ManuscriptDOI: 10.1039/D0AN00809E, Communication Open Access This article is licensed under a Creative Commons Attribution 3.0 Unported Licence.Andrew Mills, Yusufu Dilidaer, Ri HanA polymer filament, containing an O2-sensitive lumophore pigment, platinum (II) (pentafluorophenyl) porphyrin coated onto nanoparticulate silica particles, i.e. PtTFPP/SiO2, is produced and used in a filament which is then 3D...The content of this RSS Feed (c) The Royal Society of Chemistry
Tue May 26, 2020 02:00
Analyst, 2020, Advance ArticleDOI: 10.1039/D0AN00673D, PaperShimaa Eissa, Mohammed ZourobRapid and economical biosensor for Staphylococcus aureus, one of the main causes of food-borne illness, was developed based on dual colorimetric and electrochemical detection.To cite this article before page numbers are assigned, use the DOI form of citation above.The content of this RSS Feed (c) The Royal Society of Chemistry
Tue May 26, 2020 02:00
Analyst, 2020, Accepted ManuscriptDOI: 10.1039/D0AN00723D, CommunicationYoung Jun Seo, Guralamatta Siddappa Ravikumara, Anup PandithIn this study we synthesized the nucleotide dUrkTP, a highly fluorescent naphthalimide deoxyuridine triphosphate that undergoes aggregation-induced emission (AIE). We incorporated and extended dUrkTP during the primer extension of DNA...The content of this RSS Feed (c) The Royal Society of Chemistry
Tue May 26, 2020 02:00
97 new pubmed citations were retrieved for your search. Click on the search hyperlink below to display the complete search results: human physiology These pubmed results were generated on 2020/05/26PubMed comprises more than millions of citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher web sites.
Tue May 26, 2020 15:27
Amoebic toxic megacolon with poly-helminthic coinfection: Case presentation and review of intestinal polyparasitic infections. Int J Surg Case Rep. 2020 May 11;71:151-154 Authors: Yusof S, Zhao Y, Quah J, Eu CEE, Wang LM Abstract INTRODUCTION: Intestinal parasitic infections are a health burden to developing countries, but can also become more prevalent worldwide, even in developed countries, with the advent of globalization. While most of these infections...
Tue May 26, 2020 15:22
A metastatic distal-type epithelioid sarcoma: Case report and review. Int J Surg Case Rep. 2020 May 16;71:144-146 Authors: Regalbuto A, Tudosie A, Klenotic E Abstract INTRODUCTION: Epithelioid sarcoma is known as one of the rarest types of sarcomas and was identified as its own diagnosis by Dr. Franz Enzinger in 1970 after his realization of its massive overlap with many other diseases. This tumor has an aggressive clinical course with high recurrence...
Tue May 26, 2020 15:22
Canadian clinical practice guidelines for the use of plant-based cannabis and cannabinoid-based products in the management of chronic non-cancer pain and co-occurring conditions: protocol for a systematic literature review. BMJ Open. 2020 May 24;10(5):e036114 Authors: Wright P, Walsh Z, Margolese S, Sanchez T, Arlt S, Belle-Isle L, St Pierre M, Bell A, Daeninck P, Gagnon M, Lacasse G, MacCallum C, Mandarino E, Yale J, O'Hara J, Costiniuk C Abstract INTRODUCTION:...
Tue May 26, 2020 15:19
Study protocol for the antidepressant advisor (ADeSS): a decision support system for antidepressant treatment for depression in UK primary care: a feasibility study. BMJ Open. 2020 May 24;10(5):e035905 Authors: Harrison P, Carr E, Goldsmith K, Young AH, Ashworth M, Fennema D, Barrett B, Zahn R Abstract INTRODUCTION: The Antidepressant Advisor Study is a feasibility trial of a computerised decision-support tool which uses an algorithm to provide antidepressant...
Tue May 26, 2020 15:19
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Medicine by Alexandros G. Sfakianakis,Anapafseos 5 Agios Nikolaos 72100 Crete Greece,00302841026182,00306932607174,alsfakia@gmail.com,