Acrylic-based genosensor utilizing metal salphen labeling approach for reflectometric dengue virus detection

Publication date: 1 June 2019

Source: Talanta, Volume 198

Author(s): Nur-Fadhilah Mazlan, Ling Ling Tan, Nurul Huda Abd. Karim, Lee Yook Heng, Nur Diyana Jamaluddin, Nurul Yuziana Mohd. Yusof, Doris Huai Xia Quay, Bahariah Khalid

Abstract

An optical genosensor based on Schiff base complex (Zn²⁺ salphen) DNA label and acrylic microspheres (AMs) as polymer support of the capturing DNA probe (cpDNA) was developed for dengue virus serotype 2 (DEN-2) detection via reflectance spectrophotometric method. The solid-state optical DNA biosensor showed high selectivity and specificity up to one-base mismatch in the target DNA sequence owing to the salphen chemical structure that is rich in localized electrons, and allowed π-π stacking interaction between stacked base pairs of double-stranded DNA (dsDNA). The reflectometric DNA microsensor demonstrated a broad linear detection range towards DEN-2 DNA from 1 × 10^–15 M to 1 × 10⁻³ M with a low limit of detection (LOD) obtained at 1.21 × 10^–16 M. The DNA biosensor gave reproducible optical response with a satisfactory relative standard deviation (RSD) at 3.1%, (n = 3), and the reflectance response was stable even after four regeneration cycles of the DNA biosensor. The optical genosensor was proven comparable with standard reverse transcription polymerase chain reaction (RT-PCR) in detecting DEN-2 genome acquired from clinical samples of serum, urine and saliva of dengue virus infected patients under informed consent. The developed reflectometric DNA biosensor is advantageous in offering an early DEN-2 diagnosis, when fever symptom started to manifest in patient.

Graphical abstract

from A via a.sfakia on Inoreader http://bit.ly/2UQrmcO